COSAP - Comparative Sequencing Analysis Platform

Overview

COSAP is a sequencing analysis platform that encapsulates a python library, a web application and API to provide users a hassle next generation sequencing data analysis.

A typical variant calling pipeline consists of Read Trimming, Read Mapping, Duplicate Removal&Base Calibration, Variant Calling and Variant Annotation steps. COSAP provides several tool options for each of these steps.

Get Started

🛠️Getting Set Up🐳COSAP via Docker

Using COSAP Library

❔Using COSAP

Using Web Application

🌐Using the Web App

Deploying COSAP Web Application and API

🏗️Deploying COSAP